Task 11472754

Name	famous_u8wn_1799_200_006644386_0
Workunit	6847758
Created	10 Jun 2010, 12:41:35 UTC
Sent	5 Aug 2010, 14:52:31 UTC
Report deadline	4 Nov 2010, 22:19:42 UTC
Received	14 Aug 2010, 5:22:26 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	844607
Run time	3 days 10 hours 26 min 31 sec
CPU time	3 days 8 hours 52 min 59 sec
Validate state	Workunit error - check skipped
Credit	6,176.41
Device peak FLOPS	3.11 GFLOPS
Application version	UK Met Office FAMOUS v6.11 i686-apple-darwin
Stderr	<core_client_version>6.10.17</core_client_version> <![CDATA[ <stderr_txt> -30 9:13: 3:] :: BOINC:: Initializing ... ok. [2010- 7-30 9:13: 3:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Starting work on structure: _00003 Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_1 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_2 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_1 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_2 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_3 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_4 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_5 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_6 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_7 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_8 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_9 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage_3_iter1_10 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage4_kk_1 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage4_kk_2 ... success! Continuing computation from checkpoint: chk_S_00000003_ClassicAbinitio__stage4_kk_3 ... success! Starting work on structure: _00004 Starting work on structure: _00005 Starting work on structure: _00006 FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 7-30 13:32: 6:] :: BOINC:: Initializing ... ok. [2010- 7-30 13:32: 6:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Starting work on structure: _00006 Starting work on structure: _00007 ====================================================== DONE :: 1 starting structures 10122.9 cpu seconds This process generated 7 decoys from 7 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 7-30 23:36:34:] :: BOINC:: Initializing ... ok. [2010- 7-30 23:36:34:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_1fna.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 7-31 2:50:18:] :: BOINC:: Initializing ... ok. [2010- 7-31 2:50:18:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_1fna.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. ====================================================== DONE :: 46 starting structures 10533.4 cpu seconds This process generated 46 decoys from 46 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 7-31 19:15:18:] :: BOINC:: Initializing ... ok. [2010- 7-31 19:15:18:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr13_2hsh.fix.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. ====================================================== DONE :: 70 starting structures 10716.4 cpu seconds This process generated 70 decoys from 70 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 7-31 22:15:20:] :: BOINC:: Initializing ... ok. [2010- 7-31 22:15:20:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr8_4ubp.fix.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. ====================================================== DONE :: 64 starting structures 10795.2 cpu seconds This process generated 64 decoys from 64 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 1 1:16:59:] :: BOINC:: Initializing ... ok. [2010- 8- 1 1:16:59:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Starting work on structure: _00001 Starting work on structure: _00002 Starting work on structure: _00003 Starting work on structure: _00004 Starting work on structure: _00005 Starting work on structure: _00006 Starting work on structure: _00007 Starting work on structure: _00008 Starting work on structure: _00009 Starting work on structure: _00010 Starting work on structure: _00011 ====================================================== DONE :: 1 starting structures 10107 cpu seconds This process generated 11 decoys from 11 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 1 4: 7:25:] :: BOINC:: Initializing ... ok. [2010- 8- 1 4: 7:25:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/rs_stg1_core_reb_sasa_vol_t288__run1.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. [2010- 8- 1 6:40:36:] :: BOINC:: Initializing ... ok. [2010- 8- 1 6:40:36:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/rs_stg1_core_reb_sasa_vol_t288__run1.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 1 7:27:22:] :: BOINC:: Initializing ... ok. [2010- 8- 1 7:27:22:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/rs_stg1_core_reb_sasa_vol_t288__run1.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 1 7:52:22:] :: BOINC:: Initializing ... ok. [2010- 8- 1 7:52:22:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/rs_stg1_core_reb_sasa_vol_t288__run1.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Continuing computation from checkpoint: chk_S_00002_0000359_001_0072_FragmentSampler__stage1 ... success! FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 1 23:12:59:] :: BOINC:: Initializing ... ok. [2010- 8- 1 23:12:59:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/rs_stg1_core_reb_sasa_vol_t288__run1.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Continuing computation from checkpoint: chk_S_00002_0000359_001_0072_FragmentSampler__stage1 ... success! Continuing computation from checkpoint: chk_S_00002_0000359_001_0072_FragmentSampler__stage2 ... success! Continuing computation from checkpoint: chk_S_00002_0000359_001_0072_FragmentSampler__stage3 ... success! Continuing computation from checkpoint: chk_S_00002_0000359_001_0072_FragmentSampler__stage4_kk_1 ... success! Continuing computation from checkpoint: chk_S_00002_0000359_001_0072_FragmentSampler__stage4_kk_2 ... success! Continuing computation from checkpoint: chk_S_00002_0000359_001_0072_FragmentSampler__stage4_kk_3 ... success! ====================================================== DONE :: 9 starting structures 10163.8 cpu seconds This process generated 9 decoys from 9 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 1 23:35:16:] :: BOINC:: Initializing ... ok. [2010- 8- 1 23:35:16:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 2 1:24: 5:] :: BOINC:: Initializing ... ok. [2010- 8- 2 1:24: 5:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 2 2:13:55:] :: BOINC:: Initializing ... ok. [2010- 8- 2 2:13:55:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 2 3:40:42:] :: BOINC:: Initializing ... ok. [2010- 8- 2 3:40:42:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. ====================================================== DONE :: 345 starting structures 6137.54 cpu seconds This process generated 345 decoys from 345 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 2 3:42:12:] :: BOINC:: Initializing ... ok. [2010- 8- 2 3:42:12:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_1ig5.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 2 4:59:53:] :: BOINC:: Initializing ... ok. [2010- 8- 2 4:59:53:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_1ig5.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. ====================================================== DONE :: 56 starting structures 10665.5 cpu seconds This process generated 56 decoys from 56 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 2 7:16:48:] :: BOINC:: Initializing ... ok. [2010- 8- 2 7:16:48:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr13_1tit.fix.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 2 23:56:56:] :: BOINC:: Initializing ... ok. [2010- 8- 2 23:56:56:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lrm_ophs_combined_torsion_it07_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr13_1tit.fix.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Fullatom mode .. ====================================================== DONE :: 73 starting structures 10958.1 cpu seconds This process generated 73 decoys from 73 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 3 0:17:53:] :: BOINC:: Initializing ... ok. [2010- 8- 3 0:17:53:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. ====================================================== DONE :: 949 starting structures 10796.4 cpu seconds This process generated 949 decoys from 949 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 3 3:18:28:] :: BOINC:: Initializing ... ok. [2010- 8- 3 3:18:28:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Starting work on structure: _00001 Starting work on structure: _00002 Starting work on structure: _00003 Starting work on structure: _00004 Starting work on structure: _00005 Starting work on structure: _00006 Starting work on structure: _00007 Starting work on structure: _00008 Starting work on structure: _00009 Starting work on structure: _00010 Starting work on structure: _00011 Starting work on structure: _00012 Starting work on structure: _00013 Starting work on structure: _00014 Starting work on structure: _00015 Starting work on structure: _00016 Starting work on structure: _00017 Starting work on structure: _00018 Starting work on structure: _00019 Starting work on structure: _00020 Starting work on structure: _00021 ====================================================== DONE :: 1 starting structures 10474 cpu seconds This process generated 21 decoys from 21 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 3 6:13:24:] :: BOINC:: Initializing ... ok. [2010- 8- 3 6:13:24:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Starting work on structure: _00001 Starting work on structure: _00002 Starting work on structure: _00003 Starting work on structure: _00004 Starting work on structure: _00005 Starting work on structure: _00006 Starting work on structure: _00007 Starting work on structure: _00008 Starting work on structure: _00009 Starting work on structure: _00010 Starting work on structure: _00011 Starting work on structure: _00012 Starting work on structure: _00013 Starting work on structure: _00014 Starting work on structure: _00015 Starting work on structure: _00016 Starting work on structure: _00017 Starting work on structure: _00018 Starting work on structure: _00019 Starting work on structure: _00020 Starting work on structure: _00021 Starting work on structure: _00022 Starting work on structure: _00023 Starting work on structure: _00024 Starting work on structure: _00025 Starting work on structure: _00026 Starting work on structure: _00027 Starting work on structure: _00028 Starting work on structure: _00029 Starting work on structure: _00030 Starting work on structure: _00031 Starting work on structure: _00032 Starting work on structure: _00033 Starting work on structure: _00034 Starting work on structure: _00035 Starting work on structure: _00036 Starting work on structure: _00037 Starting work on structure: _00038 Starting work on structure: _00039 Starting work on structure: _00040 Starting work on structure: _00041 Starting work on structure: _00042 Starting work on structure: _00043 Starting work on structure: _00044 Starting work on structure: _00045 Starting work on structure: _00046 Starting work on structure: _00047 Starting work on structure: _00048 Starting work on structure: _00049 Starting work on structure: _00050 Starting work on structure: _00051 Starting work on structure: _00052 ====================================================== DONE :: 1 starting structures 10606.5 cpu seconds This process generated 52 decoys from 52 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish [2010- 8- 4 5:50:58:] :: BOINC:: Initializing ... ok. [2010- 8- 4 5:50:58:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_jorj_combined_torsion_it05_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_2ccv.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 4 5:55:17:] :: BOINC:: Initializing ... ok. [2010- 8- 4 5:55:17:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip [2010- 8- 4 6:27:27:] :: BOINC:: Initializing ... ok. [2010- 8- 4 6:27:27:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_jorj_combined_torsion_it05_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_2ccv.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Continuing computation from checkpoint: chk_F_00001_0000551_0_0001_FastRelax__chk1_fa ... success! Continuing computation from checkpoint: chk_F_00001_0000551_0_0001_FastRelax__chk2_fa ... success! Continuing computation from checkpoint: chk_F_00001_0000551_0_0001_FastRelax__chk3_fa ... success! Continuing computation from checkpoint: chk_F_00001_0000551_0_0001_FastRelax__chk4_fa ... success! Continuing computation from checkpoint: chk_F_00001_0000551_0_0001_FastRelax__chk5_fa ... success! Continuing computation from checkpoint: chk_F_00001_0000551_0_0001_FastRelax__chk6_fa ... success! Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. Fullatom mode .. No heartbeat from core client for 30 sec - exiting FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 4 9:11:34:] :: BOINC:: Initializing ... ok. [2010- 8- 4 9:11:34:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_jorj_combined_torsion_it05_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_2ccv.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. FILE_LOCK::unlock(): close failed.: Bad file descriptor [2010- 8- 4 9:18: 8:] :: BOINC:: Initializing ... ok. [2010- 8- 4 9:18: 8:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_jorj_combined_torsion_it05_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_2ccv.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... [2010- 8- 4 13:10:33:] :: BOINC:: Initializing ... ok. [2010- 8- 4 13:10:33:] :: BOINC :: boinc_init() BOINC:: Setting up shared resources ... ok. BOINC:: Setting up semaphores ... ok. BOINC:: Updating status ... ok. BOINC:: Registering timer callback... ok. BOINC:: Worker initialized successfully. Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Initializing options.... ok Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Loaded options.... ok Processed options.... ok Initializing random generators... ok Initialization complete. Setting WU description ... Unpacking zip data: ../../projects/boinc.bakerlab.org_rosetta/minirosetta_database_rev36507.zip Unpacking WU data ... Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/yfsong_lr5_jorj_combined_torsion_it05_run01_A.zip Unpacking data: ../../projects/boinc.bakerlab.org_rosetta/lr5_2ccv.out.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. Fullatom mode .. Continuing computation from checkpoint: chk_F_00005_0001038_0_0001_FastRelax__chk1_fa ... success! Continuing computation from checkpoint: chk_F_00005_0001038_0_0001_FastRelax__chk2_fa ... success! Continuing computation from checkpoint: chk_F_00005_0001038_0_0001_FastRelax__chk3_fa ... success! Continuing computation from checkpoint: chk_F_00005_0001038_0_0001_FastRelax__chk4_fa ... success! Continuing computation from checkpoint: chk_F_00005_0001038_0_0001_FastRelax__chk5_fa ... success! Continuing computation from checkpoint: chk_F_00005_0001038_0_0001_FastRelax__chk6_fa ... success! Fullatom mode .. ====================================================== DONE :: 31 starting structures 7184.41 cpu seconds This process generated 31 decoys from 31 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... BUFFIN: Read Failed: No such file or directory BUFFIN: C I/O Error feof - Unit 60 - Return code = 1 BUFFIN: Read Failed: No such file or directory BUFFIN: C I/O Error feof - Unit 61 - Return code = 1 BUFFIN: Read Failed: No such file or directory BUFFIN: C I/O Error feof - Unit 68 - Return code = 1 BUFFIN: Read Failed: No such file or directory BUFFIN: C I/O Error feof - Unit 69 - Return code = 1 CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... SIGSEGV: segmentation violation Crashed executable name: famous_um_6.11_i686-apple-darwin built using BOINC library version 6.11.1 Machine type Intel 80486 (32-bit executable) System version: Macintosh OS 10.6.4 build 10F569 Tue Aug 10 03:24:14 2010 sh: /usr/bin/atos: No such file or directory 0 0x0048fdcf 1 0x0049054a 2 0x94ca01fb 3 0xffffffff 4 0x0134e6b3 5 0x0134d44f 6 0x003f5826 7 0x00450bd8 8 0x004698c0 9 0x000026b6 10 0x000025dd Thread 0 crashed with X86 Thread State (32-bit): eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffd47c edx: 0x94c3a0fa edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffd4b8 esp: 0xbfffd47c ss: 0x0000001f efl: 0x00000206 eip: 0x94c3a0fa cs: 0x00000007 ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037 Binary Images Description: 0x1000 - 0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin 0x12a9000 - 0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libsvml.dylib 0x131c000 - 0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libifcoremt.dylib 0x13fc000 - 0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libimf.dylib 0x1669000 - 0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libirc.dylib 0x90eef000 - 0x90ef2fff /usr/lib/system/libmathCommon.A.dylib 0x93aab000 - 0x93ab9fff /usr/lib/libz.1.dylib 0x94c39000 - 0x94ddffff /usr/lib/libSystem.B.dylib Exiting... Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=4920, iMonCtr=1 Model crash detected, will try to restart... SIGSEGV: segmentation violation Crashed executable name: famous_um_6.11_i686-apple-darwin built using BOINC library version 6.11.1 Machine type Intel 80486 (32-bit executable) System version: Macintosh OS 10.6.4 build 10F569 Tue Aug 10 03:24:17 2010 sh: /usr/bin/atos: No such file or directory 0 0x0048fdcf 1 0x0049054a 2 0x94ca01fb 3 0xffffffff 4 0x0134e6b3 5 0x0134d44f 6 0x003f5826 7 0x00450bd8 8 0x004698c0 9 0x000026b6 10 0x000025dd Thread 0 crashed with X86 Thread State (32-bit): eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffd47c edx: 0x94c3a0fa edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffd4b8 esp: 0xbfffd47c ss: 0x0000001f efl: 0x00000206 eip: 0x94c3a0fa cs: 0x00000007 ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037 Binary Images Description: 0x1000 - 0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin 0x12a9000 - 0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libsvml.dylib 0x131c000 - 0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libifcoremt.dylib 0x13fc000 - 0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libimf.dylib 0x1669000 - 0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libirc.dylib 0x90eef000 - 0x90ef2fff /usr/lib/system/libmathCommon.A.dylib 0x93aab000 - 0x93ab9fff /usr/lib/libz.1.dylib 0x94c39000 - 0x94ddffff /usr/lib/libSystem.B.dylib Exiting... Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=4920, iMonCtr=1 Model crash detected, will try to restart... (4920): No heartbeat from core client for 30 sec - exiting CPDN Monitor - No 'heartbeat' from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... SIGSEGV: segmentation violation Crashed executable name: famous_um_6.11_i686-apple-darwin built using BOINC library version 6.11.1 Machine type Intel 80486 (32-bit executable) System version: Macintosh OS 10.6.4 build 10F569 Wed Aug 11 13:56:32 2010 sh: /usr/bin/atos: No such file or directory 0 0x0048fdcf 1 0x0049054a 2 0x94ca01fb 3 0xffffffff 4 0x0134e6b3 5 0x0134d44f 6 0x003f5826 7 0x00450bd8 8 0x004698c0 9 0x000026b6 10 0x000025dd Thread 0 crashed with X86 Thread State (32-bit): eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffd47c edx: 0x94c3a0fa edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffd4b8 esp: 0xbfffd47c ss: 0x0000001f efl: 0x00000206 eip: 0x94c3a0fa cs: 0x00000007 ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037 Binary Images Description: 0x1000 - 0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin 0x12a9000 - 0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libsvml.dylib 0x131c000 - 0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libifcoremt.dylib 0x13fc000 - 0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libimf.dylib 0x1669000 - 0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libirc.dylib 0x90eef000 - 0x90ef2fff /usr/lib/system/libmathCommon.A.dylib 0x93aab000 - 0x93ab9fff /usr/lib/libz.1.dylib 0x94c39000 - 0x94ddffff /usr/lib/libSystem.B.dylib Exiting... Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=23260, iMonCtr=1 Model crash detected, will try to restart... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... SIGSEGV: segmentation violation Crashed executable name: famous_um_6.11_i686-apple-darwin built using BOINC library version 6.11.1 Machine type Intel 80486 (32-bit executable) System version: Macintosh OS 10.6.4 build 10F569 Wed Aug 11 15:45:07 2010 sh: /usr/bin/atos: No such file or directory 0 0x0048fdcf 1 0x0049054a 2 0x94ca01fb 3 0xffffffff 4 0x0134e6b3 5 0x0134d44f 6 0x002eeac6 7 0x003f55ea 8 0x00452abd 9 0x004698c0 10 0x000026b6 11 0x000025dd Thread 0 crashed with X86 Thread State (32-bit): eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffc3ec edx: 0x94c3a0fa edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffc428 esp: 0xbfffc3ec ss: 0x0000001f efl: 0x00000206 eip: 0x94c3a0fa cs: 0x00000007 ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037 Binary Images Description: 0x1000 - 0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin 0x12a9000 - 0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libsvml.dylib 0x131c000 - 0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libifcoremt.dylib 0x13fc000 - 0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libimf.dylib 0x1669000 - 0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libirc.dylib 0x90eef000 - 0x90ef2fff /usr/lib/system/libmathCommon.A.dylib 0x93aab000 - 0x93ab9fff /usr/lib/libz.1.dylib 0x94c39000 - 0x94ddffff /usr/lib/libSystem.B.dylib Exiting... Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=25513, iMonCtr=1 Model crash detected, will try to restart... SIGSEGV: segmentation violation Crashed executable name: famous_um_6.11_i686-apple-darwin built using BOINC library version 6.11.1 Machine type Intel 80486 (32-bit executable) System version: Macintosh OS 10.6.4 build 10F569 Wed Aug 11 15:45:10 2010 sh: /usr/bin/atos: No such file or directory 0 0x0048fdcf 1 0x0049054a 2 0x94ca01fb 3 0xffffffff 4 0x0134e6b3 5 0x0134d44f 6 0x002eeac6 7 0x003f55ea 8 0x00452abd 9 0x004698c0 10 0x000026b6 11 0x000025dd Thread 0 crashed with X86 Thread State (32-bit): eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffc3ec edx: 0x94c3a0fa edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffc428 esp: 0xbfffc3ec ss: 0x0000001f efl: 0x00000206 eip: 0x94c3a0fa cs: 0x00000007 ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037 Binary Images Description: 0x1000 - 0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin 0x12a9000 - 0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libsvml.dylib 0x131c000 - 0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libifcoremt.dylib 0x13fc000 - 0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libimf.dylib 0x1669000 - 0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libirc.dylib 0x90eef000 - 0x90ef2fff /usr/lib/system/libmathCommon.A.dylib 0x93aab000 - 0x93ab9fff /usr/lib/libz.1.dylib 0x94c39000 - 0x94ddffff /usr/lib/libSystem.B.dylib Exiting... Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=25513, iMonCtr=1 Model crash detected, will try to restart... CPDN Monitor - Quit request from BOINC... SIGSEGV: segmentation violation Crashed executable name: famous_um_6.11_i686-apple-darwin built using BOINC library version 6.11.1 Machine type Intel 80486 (32-bit executable) System version: Macintosh OS 10.6.4 build 10F569 Wed Aug 11 20:06:28 2010 sh: /usr/bin/atos: No such file or directory 0 0x0048fdcf 1 0x0049054a 2 0x94ca01fb 3 0xffffffff 4 0x0134e6b3 5 0x0134d44f 6 0x003f5826 7 0x00450bd8 8 0x004698c0 9 0x000026b6 10 0x000025dd Thread 0 crashed with X86 Thread State (32-bit): eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffd47c edx: 0x94c3a0fa edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffd4b8 esp: 0xbfffd47c ss: 0x0000001f efl: 0x00000206 eip: 0x94c3a0fa cs: 0x00000007 ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037 Binary Images Description: 0x1000 - 0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin 0x12a9000 - 0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libsvml.dylib 0x131c000 - 0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libifcoremt.dylib 0x13fc000 - 0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libimf.dylib 0x1669000 - 0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libirc.dylib 0x90eef000 - 0x90ef2fff /usr/lib/system/libmathCommon.A.dylib 0x93aab000 - 0x93ab9fff /usr/lib/libz.1.dylib 0x94c39000 - 0x94ddffff /usr/lib/libSystem.B.dylib Exiting... Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=35667, iMonCtr=1 Model crash detected, will try to restart... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... SIGSEGV: segmentation violation Crashed executable name: famous_um_6.11_i686-apple-darwin built using BOINC library version 6.11.1 Machine type Intel 80486 (32-bit executable) System version: Macintosh OS 10.6.4 build 10F569 Thu Aug 12 08:29:14 2010 sh: /usr/bin/atos: No such file or directory 0 0x0048fdcf 1 0x0049054a 2 0x94ca01fb 3 0xffffffff 4 0x0134e6b3 5 0x0134d44f 6 0x003f5826 7 0x00450bd8 8 0x004698c0 9 0x000026b6 10 0x000025dd Thread 0 crashed with X86 Thread State (32-bit): eax: 0xffffffe1 ebx: 0x00000003 ecx: 0xbfffd47c edx: 0x94c3a0fa edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffd4b8 esp: 0xbfffd47c ss: 0x0000001f efl: 0x00000206 eip: 0x94c3a0fa cs: 0x00000007 ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037 Binary Images Description: 0x1000 - 0x517fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_um_6.11_i686-apple-darwin 0x12a9000 - 0x12c4fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libsvml.dylib 0x131c000 - 0x13b3fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libifcoremt.dylib 0x13fc000 - 0x1556fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libimf.dylib 0x1669000 - 0x1697fff /Library/Application Support/BOINC Data/projects/climateprediction.net/famous_u8wn_1799_200_006644386/lib/libirc.dylib 0x90eef000 - 0x90ef2fff /usr/lib/system/libmathCommon.A.dylib 0x93aab000 - 0x93ab9fff /usr/lib/libz.1.dylib 0x94c39000 - 0x94ddffff /usr/lib/libSystem.B.dylib Exiting... Controller:: CPDN process is not running, exiting, bRetVal = 1, checkPID=0, selfPID=1101, iMonCtr=1 Model crash detected, will try to restart... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... CPDN Monitor - Quit request from BOINC... (1070): called boinc_finish </stderr_txt> ]]>

Latest Trickles Received
Time Sent (UTC)	Host ID	Result ID	Result Name	Timestep	CPU Time (sec)	Average (sec/TS)
14 Aug 2010 05:23:26	844607	11472754	famous_u8wn_1799_200_006644386_0	1,872,026	291,176	0.1555
14 Aug 2010 05:23:26	844607	11472754	famous_u8wn_1799_200_006644386_0	1,862,666	289,753	0.1556
12 Aug 2010 16:21:41	844607	11472754	famous_u8wn_1799_200_006644386_0	1,853,306	288,339	0.1556
12 Aug 2010 15:55:27	844607	11472754	famous_u8wn_1799_200_006644386_0	1,843,946	286,902	0.1556
11 Aug 2010 17:23:01	844607	11472754	famous_u8wn_1799_200_006644386_0	1,834,586	285,411	0.1556
11 Aug 2010 15:57:17	844607	11472754	famous_u8wn_1799_200_006644386_0	1,825,226	283,921	0.1556
11 Aug 2010 15:31:07	844607	11472754	famous_u8wn_1799_200_006644386_0	1,815,866	282,440	0.1555
11 Aug 2010 15:08:41	844607	11472754	famous_u8wn_1799_200_006644386_0	1,806,506	280,950	0.1555
11 Aug 2010 14:42:24	844607	11472754	famous_u8wn_1799_200_006644386_0	1,797,146	279,491	0.1555
11 Aug 2010 14:20:45	844607	11472754	famous_u8wn_1799_200_006644386_0	1,787,786	278,037	0.1555
11 Aug 2010 13:54:07	844607	11472754	famous_u8wn_1799_200_006644386_0	1,778,426	276,588	0.1555
11 Aug 2010 13:28:01	844607	11472754	famous_u8wn_1799_200_006644386_0	1,769,066	275,138	0.1555
11 Aug 2010 13:05:06	844607	11472754	famous_u8wn_1799_200_006644386_0	1,759,706	273,690	0.1555
11 Aug 2010 12:06:11	844607	11472754	famous_u8wn_1799_200_006644386_0	1,750,346	272,147	0.1555
11 Aug 2010 11:34:39	844607	11472754	famous_u8wn_1799_200_006644386_0	1,740,986	270,578	0.1554
11 Aug 2010 10:08:32	844607	11472754	famous_u8wn_1799_200_006644386_0	1,731,626	269,005	0.1553
11 Aug 2010 09:37:06	844607	11472754	famous_u8wn_1799_200_006644386_0	1,722,266	267,453	0.1553
11 Aug 2010 09:09:01	844607	11472754	famous_u8wn_1799_200_006644386_0	1,712,906	265,893	0.1552
11 Aug 2010 08:41:38	844607	11472754	famous_u8wn_1799_200_006644386_0	1,703,546	264,331	0.1552
11 Aug 2010 08:12:16	844607	11472754	famous_u8wn_1799_200_006644386_0	1,694,186	262,781	0.1551